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The transcription factor scleraxis differentially regulates gene expressionin tenocytes isolated at different developmental stages.


Paterson, YZ and Evans, N and Kan, S and Cribbs, A and Henson, FMD andGuest, DJ

The transcription factor scleraxis (SCX) is expressed throughout tendon development and plays a key role in directing tendon wound healing. However, little is known regarding its role in fetal or young postnatal tendons, stages in development that are known for their enhanced regenerative capabilities. Here we used RNA-sequencing to compare the transcriptome of adult and fetal tenocytes following SCX knockdown. SCX knockdown had a larger effect on gene expression in fetal tenocytes, effecting 477 genes in comparison to the 183 genes effected in adult tenocytes, indicating that scleraxis-dependent processes may differ in these two developmental stages. Gene ontology, network and pathway analysis revealed an overrepresentation of extracellular matrix (ECM) remodelling processes within both comparisons. These included several matrix metalloproteinases, proteoglycans and collagens, some of which were also investigated in SCX knockdown tenocytes from young postnatal foals. Using chromatin immunoprecipitation, we also identified novel genes that SCX differentially interacts with in adult and fetal tenocytes. These results indicate a role for SCX in modulating ECM synthesis and breakdown and provides a useful dataset for further study into SCX gene regulation.

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Antibody
iDeal ChIP-qPCR

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Published
August, 2020

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  • ChIP kit icon
    C01010180
    iDeal ChIP-qPCR Kit
  • Mouse IgG
    C15410206
    Rabbit IgG

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