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Publications

Explore Diagenode’s publication database. Learn how our products are used in diverse fields of research.

Genome-Wide Analysis of DNA Methylation in Soybean.
Published: September, 2013
Abstract: Cytosine methylation is an important mechanism for dynamical regulation of gene expression. We identified 2162 differentially methylated regions in... Read more »
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DNA shearing Bioruptor
The BTB-Containing Protein Kctd15 Is SUMOylated In Vivo.
Published: September, 2013
Abstract: Potassium Channel Tetramerization Domain containing 15 (Kctd15) has a role in regulating the neural crest (NC) domain in the embryo. Kctd15 inhibit... Read more »
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DNA shearing Bioruptor Bioruptor Plus
Verification of Intraovum Transmission of a Microsporidium of Verte...
Published: September, 2013
Abstract: Direct transmission from parents to offspring, referred to as vertical transmission, occurs within essentially all major groups of pathogens. Sever... Read more »
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Bioruptor Cell Lysis
An integrated transcriptome and epigenome analysis identifies a nov...
Published: September, 2013
Abstract: Background Pancreatic cancer is a highly lethal cancer with limited diagnostic and therapeutic modalities. Methods To begin to explore the genom... Read more »
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Bioruptor Chromatin Shearing ChIP-seq
Human telomeres that carry an integrated copy of human herpesvirus ...
Published: September, 2013
Abstract: Linear chromosomes are stabilized by telomeres, but the presence of short dysfunctional telomeres triggers cellular senescence in human somatic tis... Read more »
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DNA shearing Bioruptor
SSR_pipeline: A Bioinformatic Infrastructure for Identifying Micros...
Published: September, 2013
Abstract: SSR_pipeline is a flexible set of programs designed to efficiently identify simple sequence repeats (e.g., microsatellites) from paired-end high-th... Read more »
Geminin Is Required for the Maintenance of Pluripotency
Published: September, 2013
Abstract: Pluripotency requires the expression of the three core transcriptions factors Oct4, Sox2 and Nanog, as well as further, complementary proteins. The... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Recent Diversification of a Marine Genus (Tursiops spp.) Tracks Hab...
Published: September, 2013
Abstract: Understanding the evolution of diversity and the resulting systematics in marine systems is confounded by the lack of clear boundaries in oceanic h... Read more »
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DNA shearing Bioruptor
Combinatorial functions of diverse histone methylations in Arabidop...
Published: September, 2013
Abstract: Previous studies in Arabidopsis thaliana have identified several histone methylation enzymes, including ARABIDOPSIS TRITHORAX1 (ATX1)/SET DOMAIN GR... Read more »
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Antibody
Epigenetic Induction of EGR-1 Expression by the Amyloid Precursor P...
Published: September, 2013
Abstract: Following transcriptome comparison of primary cultures isolated from brain of mice expressing or not the amyloid precursor protein APP, we found tr... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
MiR-210 Is Induced by Oct-2, Regulates B Cells, and Inhibits Autoan...
Published: September, 2013
Abstract: MicroRNAs (MiRs) are small, noncoding RNAs that regulate gene expression posttranscriptionally. In this study, we show that MiR-210 is induced by O... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
TET enzymatic oxidation of 5-methylcytosine, 5-hydroxymethylcytosin...
Published: September, 2013
Abstract: 5-Methylcytosine and methylated histones have been considered for a long time as stable epigenetic marks of chromatin involved in gene regulation. ... Read more »
The E7 oncoprotein from beta human papillomavirus type 38 induces t...
Published: September, 2013
Abstract: Our previous studies on cutaneous human papillomavirus (HPV) type 38 E6 and E7 oncoproteins highlighted a novel activity of IκB kinase beta (IKKβ) ... Read more »
Multivalent Engagement of TFIID to Nucleosomes.
Published: September, 2013
Abstract: The process of eukaryotic transcription initiation involves the assembly of basal transcription factor complexes on the gene promoter. The recruitm... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Practical Experiences with an Extended Screening Strategy for Genet...
Published: September, 2013
Abstract: Nowadays most animal feed products imported into Europe have a GMO (genetically modified organism) label. This means that they contain European Uni... Read more »
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Master Mix
Target Capture and Massively Parallel Sequencing of Ultraconserved ...
Published: September, 2013
Abstract: Comparative genetic studies of non-model organisms are transforming rapidly due to major advances in sequencing technology. A limiting factor in th... Read more »
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Bioruptor
Direct activation of a mouse Hoxd11 axial expression enhancer by Gd...
Published: September, 2013
Abstract: A Hoxd11/lacZ reporter, expressed with a Hoxd11-like axial expression pattern in transgenic mouse embryos, is stimulated in tailbud fragments when ... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Proteomics identifies ubiquitin-proteasome targets and new roles fo...
Published: September, 2013
Abstract: In order to identify new regulators of the phosphate (Pi) starvation signaling pathway in plants, we analyzed variation in the abundance of nuclear... Read more »
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Bioruptor
Exome sequencing identifies recurring FLT3 N676K mutations in core-...
Published: September, 2013
Abstract: The t(8;21) and inv(16)/t(16;16) rearrangements affecting the core-binding factors RUNX1 and CBFB, respectively, are found in 15% to 20% of adult d... Read more »
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DNA shearing Bioruptor
Insights into the Loblolly Pine Genome: Characterization of BAC and...
Published: September, 2013
Abstract: Despite their prevalence and importance, the genome sequences of loblolly pine, Norway spruce, and white spruce, three ecologically and economicall... Read more »
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DNA shearing Bioruptor
Evidence from mouse and man for a role of neuregulin 3 in nicotine ...
Published: September, 2013
Abstract: Addiction to nicotine and the ability to quit smoking are influenced by genetic factors. We used functional genomic approaches (chromatin immunopre... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
The p130 Isoform of Angiomotin Is Required for Yap-Mediated Hepatic...
Published: September, 2013
Abstract: The Hippo-Yap signaling pathway regulates a number of developmental and adult cellular processes, including cell fate determination, tissue growth,... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Global alterations of DNA methylation in cholangiocarcinoma targets...
Published: September, 2013
Abstract: The molecular mechanisms underlying the genesis of cholangiocarcinomas (CCs) are poorly understood. Epigenetic changes such as aberrant hypermethyl... Read more »
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DNA shearing Bioruptor IP-Star Bioruptor Plus
Farnesoid X receptor directly regulates xenobiotic detoxification g...
Published: September, 2013
Abstract: Activation of xenobiotic metabolism pathways has been linked to lifespan extension in different models of aging. However, the mechanisms underlying... Read more »
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Chromatin Shearing ChIP-qPCR
Antisense transcripts enhanced by camptothecin at divergent CpG-isl...
Published: September, 2013
Abstract: DNA Topoisomerase I (Top1) is required to relax DNA supercoils generated by RNA polymerases (RNAPs). Top1 is inhibited with high specificity by cam... Read more »
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DNA shearing Bioruptor
Phosphorylation of RNA polymerase II is independent of P-TEFb in th...
Published: September, 2013
Abstract: RNA polymerase II (Pol II) elongation in metazoans is thought to require phosphorylation of serine 2 (Ser2-P) of the Pol II C-terminal domain (CTD)... Read more »
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Bioruptor Western Blot Tissue Homogenization
A new strategy for gene targeting and functional proteomics using t...
Published: September, 2013
Abstract: DT40 cells derived from chicken B lymphocytes exhibit exceptionally high homologous recombination rates. Therefore, they can be used as a convenien... Read more »
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Bioruptor Cell Lysis Western Blot
Integrated virus-host methylome analysis in head and neck squamous ...
Published: September, 2013
Abstract: One in six cancers worldwide is caused by infection and human papillomavirus (HPV) is one of the main culprits. To better understand the dynamics o... Read more »
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DNA shearing Bioruptor IP-Star
Chromatin-specific regulation of mammalian rDNA transcription by cl...
Published: September, 2013
Abstract: Enhancers and promoters often contain multiple binding sites for the same transcription factor, suggesting that homotypic clustering of binding sit... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Ago1 Interacts with RNA Polymerase II and Binds to the Promoters of...
Published: September, 2013
Abstract: Argonaute proteins are often credited for their cytoplasmic activities in which they function as central mediators of the RNAi platform and microRN... Read more »
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Bioruptor Chromatin Shearing ChIP-seq

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