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Publications

Explore Diagenode’s publication database. Learn how our products are used in diverse fields of research.

LOcating non-unique matched tags (LONUT) to improve the detection o...
Published: June, 2013
Abstract: One big limitation of computational tools for analyzing ChIP-seq data is that most of them ignore non-unique tags (NUTs) that match the human genom... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
The Role of SIRT6 Protein in Aging and Reprogramming of Human Induc...
Published: June, 2013
Abstract: Aging is known to be the single most important risk factor for multiple diseases. Sirtuin 6, or SIRT6, has recently been identified as a critical r... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Epigenetic regulation of microRNA expression in renal cell carcinoma.
Published: June, 2013
Abstract: The underlying mechanisms of microRNA deregulation in cancer cells include epigenetic modifications, which play a crucial role in carcinogenesis. W... Read more »
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Bioruptor Cell Lysis Western Blot
Jpx RNA activates Xist by evicting CTCF.
Published: June, 2013
Abstract: In mammals, dosage compensation between XX and XY individuals occurs through X chromosome inactivation (XCI). The noncoding Xist RNA is expressed a... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Arabidopsis MSI1 connects LHP1 to PRC2 complexes
Published: June, 2013
Abstract: Polycomb group (PcG) proteins form essential epigenetic memory systems for controlling gene expression during development in plants and animals. Ho... Read more »
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LowCell ChIP kit
Improved genetic testing for monogenic diabetes using targeted next...
Published: June, 2013
Abstract: AIMS/HYPOTHESIS: Current genetic tests for diagnosing monogenic diabetes rely on selection of the appropriate gene for analysis according to the pa... Read more »
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DNA shearing Bioruptor
Myc binds the pluripotency factor Utf1 through the basic-helix-loop...
Published: June, 2013
Abstract: In order to elucidate the function of Myc in the maintenance of pluripotency and self-renewal in mouse embryonic stem cells (mESCs), we screened fo... Read more »
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Bioruptor Cell Lysis Western Blot
Senescence-associated lncRNAs: senescence-associated long noncoding...
Published: June, 2013
Abstract: Noncoding RNAs include small transcripts, such as microRNAs and piwi-interacting RNAs, and a wide range of long noncoding RNAs (lncRNAs). Although ... Read more »
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DNA shearing Bioruptor
Distinct Roles for CBP and p300 on the RA-Mediated Expression of th...
Published: June, 2013
Abstract: In mammalian germ cells, meiotic commitment requires the expression of Stimulated by retinoic acid gene 8 (Stra8), which is transcriptionally activ... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
The histone deacetylase inhibitor SAHA acts in synergism with fenre...
Published: June, 2013
Abstract: BACKGROUND: Rhabdoid tumors are highly aggressive malignancies affecting infants and very young children. In many instances these tumors are resist... Read more »
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Bioruptor Cell Lysis Western Blot
Choroid-plexus-derived Otx2 homeoprotein constrains adult cortical ...
Published: June, 2013
Abstract: Brain plasticity is often restricted to critical periods in early life. Here, we show that a key regulator of this process in the visual cortex, Ot... Read more »
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Bioruptor Cell Lysis
Centromere binding and a conserved role in chromosome stability for...
Published: June, 2013
Abstract: The Saccharomyces cerevisiae Slx5/8 complex is the founding member of a recently defined class of SUMO-targeted ubiquitin ligases (STUbLs). Slx5/8 ... Read more »
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Bioruptor Chromatin Shearing
Temporal transcriptional response to ethylene gas drives growth hor...
Published: June, 2013
Abstract: The gaseous plant hormone ethylene regulates a multitude of growth and developmental processes. How the numerous growth control pathways are coord... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Discovery of potential new gene variants and inflammatory cytokine ...
Published: June, 2013
Abstract: Fibromyalgia syndrome (FMS) is a chronic musculoskeletal pain disorder affecting 2% to 5% of the general population. Both genetic and environmental... Read more »
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DNA shearing Bioruptor
Distinct roles of KAP1, HP1 and G9a/GLP in silencing of the two-cel...
Published: June, 2013
Abstract: BACKGROUND: In mouse embryonic stem cells (mESCs), transcriptional silencing of numerous class I and II endogenous retroviruses (ERVs), including I... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Autolysosomal β-catenin degradation regulates Wnt-autophagy-p62 cro...
Published: June, 2013
Abstract: The Wnt/β-catenin signalling and autophagy pathways each play important roles during development, adult tissue homeostasis and tumorigenesis. Here ... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
HPV-related methylation signature predicts survival in oropharyngea...
Published: June, 2013
Abstract: High-risk types of human papilloma virus (HPV) are increasingly associated with oropharyngeal squamous cell carcinoma (OPSCC). Strikingly, patients... Read more »
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DNA shearing Bioruptor IP-Star
Nuclear receptor/microRNA circuitry links muscle fiber type to ener...
Published: June, 2013
Abstract: The mechanisms involved in the coordinate regulation of the metabolic and structural programs controlling muscle fitness and endurance are unknown.... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Reference-free SNP discovery for the Eurasian beaver from restricti...
Published: June, 2013
Abstract: In this study, we used restriction site-associated DNA (RAD) sequencing to discover SNP markers suitable for population genetic and parentage analy... Read more »
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DNA shearing Bioruptor
The Glucocorticoid Receptor and KLF15 Regulate Gene Expression Dyna...
Published: June, 2013
Abstract: The glucocorticoid receptor (GR) regulates adaptive transcriptional programs that alter metabolism in response to stress. Network properties that a... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Functional dissection of the PROPEP2 and PROPEP3 promoters reveals ...
Published: June, 2013
Abstract: · In Arabidopsis thaliana, small peptides (AtPeps) encoded by PROPEP genes act as damage-associated molecular patterns (DAMPs) that are perceived b... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR Bioruptor Plus
A new strategy for selective targeting of progesterone receptor wit...
Published: June, 2013
Abstract: Currently available progesterone (P4) receptor (PR) antagonists, such as mifepristone (RU486), lack specificity and display partial agonist propert... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR HighCell ChIP kit
Partial functional redundancy between Hoxa5 and Hoxb5 paralog genes...
Published: June, 2013
Abstract: Hox genes encode transcription factors governing complex developmental processes in several organs. A subset of Hox genes are expressed in the deve... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
HOXA13 regulates Aldh1a2 expression in the autopod to facilitate in...
Published: June, 2013
Abstract: Background: Retinoic acid (RA), plays an essential role in the growth and patterning of vertebrate limb. While the developmental processes regulate... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Dynamic changes in 5-hydroxymethylation signatures underpin early a...
Published: June, 2013
Abstract: Aberrant DNA methylation is a common feature of neoplastic lesions, and early detection of such changes may provide powerful mechanistic insights a... Read more »
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DNA shearing Bioruptor
A novel role for Sem1 and TREX-2 in transcription involves their im...
Published: June, 2013
Abstract: Transcription and mRNA export are linked processes. However, the molecular mechanisms of this coordination are not clear. Sus1 (hENY2) participates... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
ASCL1 reprograms mouse Muller glia into neurogenic retinal progenit...
Published: June, 2013
Abstract: Non-mammalian vertebrates have a robust ability to regenerate injured retinal neurons from Müller glia (MG) that activate the gene encoding the pro... Read more »
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LowCell ChIP kit
Measurement of phosphoinositides in the zebrafish Danio rerio.
Published: June, 2013
Abstract: Phosphoinositides represent a minor fraction of the total glycerolipids in cells. Despite the fact that phosphoinositides are present in small quan... Read more »
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Bioruptor
Protective role of functionalized single walled carbon nanotubes en...
Published: June, 2013
Abstract: In this study, carboxylic acid functionalized single walled carbon nanotubes (f-SWCNT-COOH) was shown to support the viability and ex vivo expansio... Read more »
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Bioruptor
Transcriptome-wide mapping of 5-methylcytidine RNA modifications in...
Published: June, 2013
Abstract: The presence of 5-methylcytidine (m(5)C) in tRNA and rRNA molecules of a wide variety of organisms was first observed more than 40 years ago. Howev... Read more »
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Antibody 5mC (C15200081)

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