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Publications

Explore Diagenode’s publication database. Learn how our products are used in diverse fields of research.

Histone variant macroH2A marks embryonic differentiation in vivo an...
Published: October, 2012
Abstract: How cell fate becomes restricted during somatic cell differentiation is a long lasting question in biology. Epigenetic mechanisms not present in pl... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Epigenetic Regulation of Condensin-Mediated Genome Organization dur...
Published: October, 2012
Abstract: Complex genome organizations participate in various nuclear processes including transcription, DNA replication, and repair. However, the mechanisms... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Nucleolar accumulation of APE1 depends on charged lysine residues t...
Published: October, 2012
Abstract: Apurinic/apyrimidinic endonuclease 1 (APE1) is the main abasic endonuclease in the base excision repair (BER) pathway of DNA lesions caused by oxid... Read more »
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Bioruptor Chromatin Shearing
MBD2 and multiple domains of CHD4 are required for transcriptional ...
Published: October, 2012
Abstract: Mi-2/nucleosome remodeling and deacetylase (NuRD) chromatin remodeling complexes are important regulators of chromatin structure and DNA accessibil... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Human RNA Methyltransferase BCDIN3D Regulates MicroRNA Processing.
Published: October, 2012
Abstract: MicroRNAs (miRNAs) regulate key biological processes and their aberrant expression may lead to cancer. The primary transcript of canonical miRNAs i... Read more »
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Bioruptor
MeDIP coupled with a promoter tiling array as a platform to investi...
Published: October, 2012
Abstract: Hypermethylation of CpGs in promoter regions and subsequent changes in gene expression are common features in acute myeloid leukemia (AML). Genome-... Read more »
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DNA shearing Bioruptor
Tripartite Motif Containing 28 (Trim28) can Regulate Cell Prolifera...
Published: October, 2012
Abstract: Trim28 is a poorly understood transcriptional co-factor with pleiotropic biological activities. Although Trim28 mRNA is found in many studies to be... Read more »
New partners in regulation of gene expression: the enhancer of trit...
Published: October, 2012
Abstract: Chromodomains are found in many regulators of chromatin structure, and most of them recognize methylated lysines on histones. Here, we investigate ... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR Antibody H3K4me3 (C15410003) H3K27me3 (C15410069) IPure kit
The Many Landscapes of Recombination in Drosophila melanogaster.
Published: October, 2012
Abstract: Recombination is a fundamental biological process with profound evolutionary implications. Theory predicts that recombination increases the effecti... Read more »
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DNA shearing Bioruptor
Oxidative stress-regulated lentiviral TK/GCV gene therapy for lung ...
Published: October, 2012
Abstract: NRF2 is a transcription factor that regulates protection against a wide variety of toxic insults to cells, including cytotoxic cancer chemotherapeu... Read more »
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DNA shearing Bioruptor
FXR Controls the Tumor Suppressor NDRG2 and FXR Agonists Reduce Liv...
Published: October, 2012
Abstract: The farnesoid X receptor (FXR) is expressed predominantly in tissues exposed to high levels of bile acids and controls bile acid and lipid homeosta... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Adhesion Regulates MAP Kinase/Ternary Complex Factor Exchange to Co...
Published: October, 2012
Abstract: BACKGROUND: The ternary complex factors (TCFs; Elk1, Net, and Sap-1) are growth factor-responsive transcription cofactors of serum response factor ... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Initial Characterization of the Pf-Int Recombinase from the Malaria...
Published: October, 2012
Abstract: BACKGROUND: Genetic variation is an essential means of evolution and adaptation in many organisms in response to environmental change. Certain DNA ... Read more »
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DNA shearing Bioruptor
Read length versus Depth of Coverage for Viral Quasispecies Reconst...
Published: October, 2012
Abstract: Recent advancements of sequencing technology have opened up unprecedented opportunities in many application areas. Virus samples can now be sequenc... Read more »
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DNA shearing Bioruptor
Non-genotoxic carcinogen exposure induces defined changes in the 5-...
Published: October, 2012
Abstract: ABSTRACT: BACKGROUND: Induction and promotion of liver cancer by exposure to non-genotoxic carcinogens coincides with epigenetic perturbations, in... Read more »
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DNA shearing Bioruptor Antibody
Regulation of delta-aminolevulinic Acid dehydratase by krüppel-like...
Published: October, 2012
Abstract: Krüppel-like factor 1(KLF1) is a hematopoietic-specific zinc finger transcription factor essential for erythroid gene expression. In concert with t... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
A genome-wide signature of glucocorticoid receptor binding in neuro...
Published: October, 2012
Abstract: ABSTRACT: BACKGROUND: Glucocorticoids, secreted by the adrenals in response to stress, profoundly affect structure and plasticity of neurons. Gluco... Read more »
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Bioruptor Chromatin Shearing ChIP-seq
Human β cell transcriptome analysis uncovers lncRNAs that are tissu...
Published: October, 2012
Abstract: A significant portion of the genome is transcribed as long noncoding RNAs (lncRNAs), several of which are known to control gene expression. The rep... Read more »
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Antibody
Features of the Arabidopsis recombination landscape resulting from ...
Published: October, 2012
Abstract: The rate of meiotic crossing over (CO) varies considerably along chromosomes, leading to marked distortions between physical and genetic distances.... Read more »
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DNA shearing Bioruptor Antibody
Epigenetic transgenerational inheritance of vinclozolin induced mou...
Published: October, 2012
Abstract: The endocrine disruptor vinclozolin has previously been shown to promote epigenetic transgenerational inheritance of adult onset disease in the rat... Read more »
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Antibody
The GLIB technique for genome-wide mapping of 5-hydroxymethylcytosine.
Published: October, 2012
Abstract: 5-Hydroxymethylcytosine (5hmC) is a newly discovered DNA base present at detectable levels in most mammalian cell types and tissues. It is generate... Read more »
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DNA shearing Bioruptor
ChIP-exo Method for Identifying Genomic Location of DNA-Binding Pro...
Published: October, 2012
Abstract: This unit describes the ChIP-exo methodology, which combines chromatin immunoprecipitation (ChIP) with lambda exonuclease digestion followed by hig... Read more »
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Bioruptor Chromatin Shearing ChIP-seq
Maize Unstable factor for orange1 Is Required for Maintaining Silen...
Published: October, 2012
Abstract: To understand the molecular mechanisms underlying paramutation, we examined the role of Unstable factor for orange1 (Ufo1) in maintaining paramutat... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
The histone demethylase PHF8 is essential for cytoskeleton dynamics.
Published: October, 2012
Abstract: PHF8 is a histone demethylase associated with X-linked mental retardation. It has been described as a transcriptional co-activator involved in cell... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
Promoter DNA methylation couples genome-defence mechanisms to epige...
Published: October, 2012
Abstract: Mouse primordial germ cells (PGCs) erase global DNA methylation (5mC) as part of the comprehensive epigenetic reprogramming that occurs during PGC ... Read more »
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DNA shearing Bioruptor
Draft Genome Sequence of Lactobacillus rossiae DSM 15814T.
Published: October, 2012
Abstract: The draft genome sequence of Lactobacillus rossiae DSM 15814(T) (CS1, ATCC BAA-88) was determined by a whole-genome shotgun approach. Reads were as... Read more »
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DNA shearing Bioruptor
Human-specific CpG "beacons" identify loci associated with human-sp...
Published: October, 2012
Abstract: Regulatory change has long been hypothesized to drive the delineation of the human phenotype from other closely related primates. Here we provide e... Read more »
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DNA shearing Bioruptor IP-Star
Association of UHRF1 with methylated H3K9 directs the maintenance o...
Published: September, 2012
Abstract: A fundamental challenge in mammalian biology has been the elucidation of mechanisms linking DNA methylation and histone post-translational modifica... Read more »
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Antibody 5mC (C15200081)
FRUIT, a Scar-Free System for Targeted Chromosomal Mutagenesis, Epi...
Published: September, 2012
Abstract: Recombineering is a widely-used approach to delete genes, introduce insertions and point mutations, and introduce epitope tags into bacterial chrom... Read more »
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Bioruptor Chromatin Shearing ChIP-qPCR
A Quantitative Proteomic Workflow for Characterization of Frozen Cl...
Published: September, 2012
Abstract: This paper describes a simple, highly efficient and robust proteomic workflow for routine liquid-chromatography tandem mass spectrometry analysis o... Read more »
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Bioruptor Cell Lysis Mass Spectrometry

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